From: Novel perspectives for evolving enzyme cocktails for lignocellulose hydrolysis in biorefineries
Fungi | Bacteria | Enzyme | Function |
---|---|---|---|
Cellulases | |||
Aspergillus, Trichoderma, Anaeromyces, Pestalotiopsis, Phanerochaete, Fusarium, Orpinomyces, Piromyces | Bacillus, Pseudomonas, Ruminococcus, Fibrobacter, Clostrdium, Halomonas, Streptomyces, Cellulomonas, Mycobacterium | Endo −1,4 β-D-glucanglucanohydrolase (E. C. 3. 2. 1.4) | Hydrolysis of the internal glycosidic linkages in a random fashion, generating oligosaccharides of varying lengths |
Trichoderma, Penicillium, Aspergillus, Chaetomium, Fusarium, Pestalotiopsis, Orpinomyces, Piromyces, Rhizopus | Bacillus, Pseudomonas, Clostridium, Paenibacillus, Thermobifida, Cellulomonas, Mycobacterium, Ralstonia | Exoglucanase or 1,4-β-D-glucan cellobiohydrolase (E.C.3.2.1.91) | Hydrolysis of beta-D-glucosidic linkages by releasing mainly cellobiose either from the reducing or non-reducing ends of the chains |
Aspergillus, Monilia, Phanerochaete, Sclerotium, Saccharomyces, Kluyveromyces | Clostridium, Cellulomonas, Aerobacter, Leuconostoc | β - glucosidases or β-D-glucoside gluco-hydrolase (E.C.3.2.1.21) | Hydrolysis of terminal, non-reducing β-D-glucosyl residues with release of β-D-glucose |
 | Clostridium, Cellvibrio | Cellodextrin phosphorylase or (1 → 4)-β-D-glucan:phosphate α-D-glucosyltransferase (E.C. 2.4.1.49) | Catalysis of the reversible phosphorolytic cleavage of cellodextrins ranging from cellotriose to cellohexoses |
Fomes annosus | Cellulomonas, Clostridium, Ruminococcus, Thermotoga, Cellvibrio | Cellobiose phosphorylase or cellobiose: phosphate alpha-D-glucosyltransferase (E.C. 2.4.1.20) | Catalysis of the reversible phosphorolytic cleavage of cellobiose |
Hemicellulases | |||
Aspergillus, Trichoderma, Thermomyces, Fusarium, Anaeromyces, Neocallimastix | Bacillus, Thermoanaerobacterium, Ruminococcus, Geobacillus, Thermopolyspora, Cellulomonas, Streptomyces | Endo-1,4-beta-D-xylanase or 1,4-beta-xylan xylanohydrolase (EC 3.2.1.8) | Endohydrolysis of (1 → 4)-beta-D-xylosidic linkages in xylans to release xylose |
Aspergillus, Fusarium, Talaromyces, Trichoderma | Bacillus, Thermoanaerobacterium, Geobacillus, | Xylan β-1,4-xylosidase (EC 3.2.1.37) | Hydrolysis of (1 → 4)-beta-D-xylans, to remove successive D-xylose residues from the non-reducing termini |
Aspergillus, Trichoderma | Cellulomonas, Bacillus, Clostridium, Rhodothermus | Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78) | Random hydrolysis of (1 → 4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans |
Aspergillus, Penicillium, Fusarium, Trichoderma | Bifidobacterium, Thermobacillus, Bacillus, Clostridium, Streptomyces | Alpha-L-arabinofuranosidase (EC 3.2.1.55) | Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides |
Penicillium, Aspergillus, Trichoderma, Phanerochaete, Chrysosporium, | Bacillus, Clostridium, Streptomyces, Fibrobacter, Pseudomonas, Thermoanaerobacterium | Acetyl (xylan) esterase (EC 3.1.1.72) | Hydrolysis of ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan |
Fusarium, Beauveria, Penicillium, Trichoderma, Neurospora, Aspergillus | Thermotoga, Bifidobacterium, Streptococcus, Bacillus, Cellulomonas, Clostridium | Alpha-L-fucoside fucohydrolase or alpha-L-fucosidase (EC 3.2.1.51) | Hydrolysis of O-glycosyl bond in xyloglucan to release l-fucose residues |
Aspergillus, Trichoderma, Thermoascus | Thermotoga, Cellvibrio, Bacteroides, Bacillus | Alpha-D-glucosiduronate glucuronohydrolase or α-glucuronidase (EC 3.2.1.139) | Hydrolysis of O-glycosyl bond to release 4-O-methylglucuronic acid from xylan |
Novel proteins | |||
Trichoderma, Aspergillus, Neosartorya, Humicola, Fusarium, Penicillium, Neurospora, Gliocladium, Candida, Pichia, Rhodotorula, Sporobolomyces | Bacillus, Cellulomonas, Clostridium, Myceliophthora, Thermomonospora, Streptomyces, Fibrobacter | Swollenins | Homologous to plant expansins which rapidly induce extension of plant cell walls by weakening the noncovalent interactions; Contain an N-terminal carbohydrate-binding module family 1 domain (CBD) with cellulose-binding function and a C-terminal expansin-like domain. |
Bjerkandera adusta |  | Loosenins | A novel expansin-type protein with part of the sequence similar to the DPBB (double psi beta barrel) domain present in plant expansins, and fungal β-1,4-endoglucanase family 45; Bind tightly to polysaccharides and show loosening activity which permits sugar release |
Trichoderma, Schizophyllum, Pyrenophora | Streptomyces coelicolor | Cellulose induced proteins (CIP1 and CIP2) | Contain a carbohydrate-binding module (CBM); Hydrolysis of the ester linkage between 4-O-methyl-D-glucuronic acid of glucuronoxylan and lignin alcohols |